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Mouse Histology & Phenotyping Laboratory

Our Mission

The mission of the MHPL is to provide customized and comprehensive histopathology and molecular phenotyping support for research using various animal research models.

The wide-array of services provided by MHPL help Northwestern researchers in the following aspects of their research endeavours:

  • Elucidation of the physiologic functions of genes and their mutations
  • Mechanisms of the etiology, development and progression of various diseases
  • Evaluation of immune response to diseases and therapeutic interventions
  • Toxicology and therapeutic efficacy assessment of pharmacological agents and exogenously administered substances
  • Evaluation of novel surgical procedures and implanted devices

What We Do

HISTOPATHOLOGY SERVICES

  • Automated tissue processing (paraffin)
  • Tissue grossing and embedding (FFPE, frozen and hydrogel)
  • Microtomy (paraffin and cryostat)
  • Training for independent use of cryostat and vibratome
  • Cryostat and vibratome self-service rental
  • Standard histology stains (H&E, MTC, PAS)
  • Special histology stains (>30) and customized stains
  • RNAse-free microtomy for FISH/RNAscope and spatial genomics applications
  • Pathology interpretation and phenotypic scoring of stained slides
  • Consultations in developmental biology, rodent genetics, necropsy and dissection

MOLECULAR PHENOTYPING SERVICES

  • Chromogenic immunohistochemistry (IHC)
  • Antibody validation and workups for IHC
  • Enzyme histochemistry
  • Lectin histochemistry or fluorescent stains
  • Multiplex immunofluorescence
  • Cell death assays (TUNEL, cleaved CASP3 IHC)
  • Chromogenic and multiplex in situ hybridization (ISH: RNAscope, DNAscope, miRNAscope, RNAscope PLUS)
  • Customized co-detection of protein and nucleic acid targets (multiplex IF plus RNAscope)
  • Optical clearing of whole organs and tissues (X-CLARITY, Fast 3D Clear, or SHIELD)
  • Whole-mount immunofluorescence (cell or tissue culture, vibratome sections, organoids, optically cleared organs)