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Publications

The following is a list of selected publications from our faculty. For complete listings of individual faculty member's publications, see our faculty profiles.

  1. Li X, Fan H, Song X, Song B, Liu W, Dong R, Zhang H, Guo S, Liang H, Schrodi SJ  et al.  DNA methylome and transcriptome profiling reveal key electrophysiology and immune dysregulation in hypertrophic cardiomyopathy.  Epigenetics  2023 Dec;18(1):2195307. pii:2195307
  2. Morrell MA, Willis TR, Brown DR, O'Brian CA, Post SL, Woloschak GE, Bonini MG, Paunesku T, Popovic J, Manning TM  et al.  Lessons learned in the practice of community-based participatory research with community partner collaboration in study design and implementation: the community scientist model.  Cancer Causes Control  2023 Jul;34(7):621-624. doi:10.1007/s10552-023-01699-7
  3. Hosseini O, Wang J, Lee O, Pulliam N, Mohamed A, Shidfar A, Chatterton RT, Blanco L, Meindl A, Helenowski I  et al.  ASO Visual Abstract: Menstrual Phase and Menopausal Status Classification of Benign Breast Tissue Using Hormone-Regulated Gene Expression and Histomorphology: A Validation Study.  Ann Surg Oncol  2023 May 23;. doi:10.1245/s10434-023-13389-4
  4. Wu SA, Jia DT, Schwartz M, Mulcahy M, Guo K, Tate MC, Sachdev S, Kostelecky N, Escobar DJ, Brat DJ  et al.  HER2+ esophageal carcinoma leptomeningeal metastases treated with intrathecal trastuzumab regimen.  CNS Oncol  2023 May 23;:CNS99. doi:10.2217/cns-2022-0018
  5. Anvery N, Kang B, Christensen RE, Dirr MA, Nadir U, Brieva JC, Council ML, Dover JS, Kuzel TM, Minkis K  et al.  Minimum Thresholds Deemed Acceptable by Patients and Physicians for Sensitivity and Specificity of Mobile Skin Cancer Screening Algorithms.  J Am Acad Dermatol  2023 May 13;. pii:S0190-9622(23)00832-0
  6. Copeland-Hardin L, Paunesku T, Murley JS, Crentsil J, Antipova O, Li L, Maxey E, Jin Q, Hooper D, Lai B  et al.  Proof of principle study: synchrotron X-ray fluorescence microscopy for identification of previously radioactive microparticles and elemental mapping of FFPE tissues.  Sci Rep  2023 May 13;13(1):7806. pii:7806
  7. York D, Falciglia GH, Managlia E, Yan X, Yoon H, Hamvas A, Kirchenbuechler D, Arvanitis C, De Plaen IG  Nailfold Capillaroscopy: A Promising Non-invasive Approach to Predict Retinopathy of Prematurity.  J Pediatr  2023 May 12;:113478. doi:10.1016/j.jpeds.2023.113478
  8. Cuchel M, Lee PC, Hudgins LC, Duell PB, Ahmad Z, Baum SJ, Linton MF, de Ferranti SD, Ballantyne CM, Larry JA  et al.  Contemporary Homozygous Familial Hypercholesterolemia in the United States: Insights From the CASCADE FH Registry.  J Am Heart Assoc  2023 May 02;12(9):e029175. doi:10.1161/JAHA.122.029175
  9. Sonabend AM, Gould A, Amidei C, Ward R, Schmidt KA, Zhang DY, Gomez C, Bebawy JF, Liu BP, Bouchoux G  et al.  Repeated blood-brain barrier opening with an implantable ultrasound device for delivery of albumin-bound paclitaxel in patients with recurrent glioblastoma: a phase 1 trial.  Lancet Oncol  2023 May;24(5):509-522. doi:10.1016/S1470-2045(23)00112-2
  10. Vitale I, Pietrocola F, Guilbaud E, Aaronson SA, Abrams JM, Adam D, Agostini M, Agostinis P, Alnemri ES, Altucci L  et al.  Apoptotic cell death in disease-Current understanding of the NCCD 2023.  Cell Death Differ  2023 May;30(5):1097-1154. doi:10.1038/s41418-023-01153-w
  11. Mittal BB, Vaughan DE  Inclusion of epigenetic age acceleration in oncological trials.  Lancet Healthy Longev  2023 May;4(5):e185-e186. doi:10.1016/S2666-7568(23)00034-X
  12. Qian DC, Sykes-Martin KD, Tobillo R, Ali N, Wynne JF, Eaton BR, Paulino AC, Kalapurakal JA, Esiashvili N  Impact of Age on Overall Survival Among Children With Wilms Tumor: A Population-based Registry Analysis.  Am J Clin Oncol  2023 May 01;46(5):213-218. doi:10.1097/COC.0000000000000990
  13. Sachdev S, Dmello C, Sonabend AM  Radiosensitization of IDH-Mutated Gliomas through ZMYND8 - a Pathway to Improved Outcomes.  Clin Cancer Res  2023 May 01;29(9):1648-1650. doi:10.1158/1078-0432.CCR-23-0018
  14. Yuan Y, Jin A, Neal B, Feng X, Qiao Q, Wang H, Zhang R, Li J, Duan P, Cao L  et al.  Salt substitution and salt-supply restriction for lowering blood pressure in elderly care facilities: a cluster-randomized trial.  Nat Med  2023 Apr;29(4):973-981. doi:10.1038/s41591-023-02286-8
  15. Youngblood MW, Tran AN, Wang W, An S, Scholtens D, Zhang L, O'Shea K, Pokorny JL, Magill ST, Sachdev S  et al.  Docetaxel targets aggressive methylation profiles and serves as a radiosensitizer in high-risk meningiomas.  Neuro Oncol  2023 Mar 14;25(3):508-519. doi:10.1093/neuonc/noac206
  16. Kumthekar PU, Avram MJ, Lassman AB, Lin NU, Lee E, Grimm SA, Schwartz M, Bell Burdett KL, Lukas RV, Dixit K  et al.  A phase I/II study of intrathecal trastuzumab in human epidermal growth factor receptor 2-positive (HER2-positive) cancer with leptomeningeal metastases: Safety, efficacy, and cerebrospinal fluid pharmacokinetics.  Neuro Oncol  2023 Mar 14;25(3):557-565. doi:10.1093/neuonc/noac195
  17. Lin T, Zhao R, Tu S, Wu H, Zhang H, Tu XM  On modelling relative risks for longitudinal binomial responses: implications from two dueling paradigms.  Gen Psychiatr  2023;36(2):e100977. pii:e100977
  18. Hosseini O, Wang J, Lee O, Pulliam N, Mohamed A, Shidfar A, Chatterton RT, Blanco L, Meindl A, Helenowski I  et al.  Menstrual Phase and Menopausal Status Classification of Benign Breast Tissue Using Hormone-Regulated Gene Expression and Histomorphology: A Validation Study.  Ann Surg Oncol  2023 Mar 01;. doi:10.1245/s10434-023-13192-1
  19. Zhang H, Alarcon C, Cavallari LH, Nutescu E, Carvill GL, Perera MA, Hernandez W  Genomewide Association Study Identifies Copy Number Variants Associated With Warfarin Dose Response and Risk of Venous Thromboembolism in African Americans.  Clin Pharmacol Ther  2023 Mar;113(3):624-633. doi:10.1002/cpt.2820
  20. Liu L, Khan A, Sanchez-Rodriguez E, Zanoni F, Li Y, Steers N, Balderes O, Zhang J, Krithivasan P, LeDesma RA  et al.  Author Correction: Genetic regulation of serum IgA levels and susceptibility to common immune, infectious, kidney, and cardio-metabolic traits.  Nat Commun  2023 Feb 06;14(1):655. pii:655
  21. Varela ML, Comba A, Faisal SM, Argento A, Franson A, Barissi MN, Sachdev S, Castro MG, Lowenstein PR  Gene Therapy for High Grade Glioma: The Clinical Experience.  Expert Opin Biol Ther  2023 Feb;23(2):145-161. doi:10.1080/14712598.2022.2157718
  22. Karpouzian-Rogers T, Makowski-Woidan B, Kuang A, Zhang H, Fought A, Engelmeyer J, Mesulam MM, Weintraub S, Rogalski E  NIH Toolbox® Episodic Memory Measure Differentiates Older Adults with Exceptional Memory Capacity from those with Average-for-Age Cognition.  J Int Neuropsychol Soc  2023 Feb;29(2):230-234. doi:10.1017/S135561772200008X
  23. Zhang L, Lin Y, Wang K, Han L, Zhang X, Gao X, Li Z, Zhang H, Zhou J, Yu H  et al.  Multiple-model machine learning identifies potential functional genes in dilated cardiomyopathy.  Front Cardiovasc Med  2022;9:1044443. pii:1044443
  24. Kawles A, Minogue G, Zouridakis A, Keszycki R, Gill N, Nassif C, Coventry C, Zhang H, Rogalski E, Flanagan ME  et al.  Differential vulnerability of the dentate gyrus to tauopathies in dementias.  Acta Neuropathol Commun  2023 Jan 03;11(1):1. pii:1
  25. Lilek J, Ajroud K, Feldman AZ, Krishnamachari S, Ghourchian S, Gefen T, Spencer CL, Kawles A, Mao Q, Tranovich JF  et al.  Accumulation of pTau231 at the Postsynaptic Density in Early Alzheimer's Disease.  J Alzheimers Dis  2023;92(1):241-260. doi:10.3233/JAD-220848
  26. Zhao S, Li J, Zhang H, Qi L, Du Y, Kogiso M, Braun FK, Xiao S, Huang Y, Li J  et al.  Publisher Correction: Epigenetic alterations of repeated relapses in patient-matched childhood ependymomas.  Nat Commun  2022 Dec 22;13(1):7871. pii:7871
  27. Newhauser WD, Williams JP, Noska MA, Borrás C, Holahan EV, Dewji SA, Johnson TE, Hiatt JW, Poston JW, Hertel N  et al.  The professional radiation workforce in the United States.  J Appl Clin Med Phys  2022 Dec;23 Suppl 1(Suppl 1):e13848. pii:e13848
  28. Newhauser WD, Williams JP, Noska MA, Borrás C, Holahan EV, Dewji SA, Johnson TE, Hiatt JW, Poston JW, Hertel N  et al.  Summary and conclusions, and abbreviations and acronyms.  J Appl Clin Med Phys  2022 Dec;23 Suppl 1(Suppl 1):e13846. pii:e13846
  29. Williams JP, Anscher MS, Vazquez M, Kronenberg A, Willey JS, Lawrence T, Woloschak GE, Marples B, Wong R, Howell RW  Radiation biology workforce in the United States.  J Appl Clin Med Phys  2022 Dec;23 Suppl 1(Suppl 1):e13743. pii:e13743
  30. Paller AS, Yosipovitch G, Weidinger S, DiBenedetti D, Whalley D, Gadkari A, Guillemin I, Zhang H, Eckert L, Chao J  et al.  Development, Psychometric Validation and Responder Definition of Worst Itch Scale in Children with Severe Atopic Dermatitis.  Dermatol Ther (Heidelb)  2022 Dec;12(12):2839-2850. doi:10.1007/s13555-022-00804-z
  31. Zhang B, Guo J, Zhang H  Design and analysis of crossover trials for investigating high-risk medical devices: A review.  Contemp Clin Trials Commun  2022 Dec;30:101004. pii:101004
  32. Siddiqui S, Bachert C, Chaker AM, Han JK, Hellings PW, Peters AT, Heffler E, Kamat S, Zhang H, Nash S  et al.  AROMA: real-world global registry of dupilumab for chronic rhinosinusitis with nasal polyps.  ERJ Open Res  2022 Oct;8(4). pii:00085-2022
  33. Goodman CR, Strauss JB  One Way or Another: An Oligorecurrence After an Oligometastasis of an Estrogen Receptor-Positive Breast Cancer.  Int J Radiat Oncol Biol Phys  2022 Nov 15;114(4):571-572. doi:10.1016/j.ijrobp.2022.02.029
  34. Liu L, Khan A, Sanchez-Rodriguez E, Zanoni F, Li Y, Steers N, Balderes O, Zhang J, Krithivasan P, LeDesma RA  et al.  Genetic regulation of serum IgA levels and susceptibility to common immune, infectious, kidney, and cardio-metabolic traits.  Nat Commun  2022 Nov 11;13(1):6859. pii:6859
  35. Xenias HS, Chen C, Kang S, Cherian S, Situ X, Shanmugasundaram B, Liu G, Scesa G, Savio Chan C, Parisiadou L  R1441C and G2019S LRRK2 knockin mice have distinct striatal molecular, physiological, and behavioral alterations.  Commun Biol  2022 Nov 10;5(1):1211. pii:1211
  36. Parnell E, Culotta L, Forrest MP, Jalloul HA, Eckman BL, Loizzo DD, Horan KKE, Dos Santos M, Piguel NH, Tai DJC  et al.  Excitatory Dysfunction Drives Network and Calcium Handling Deficits in 16p11.2 Duplication Schizophrenia Induced Pluripotent Stem Cell-Derived Neurons.  Biol Psychiatry  2022 Nov 09;. pii:S0006-3223(22)01718-8
  37. Nassif C, Kawles A, Ayala I, Minogue G, Gill NP, Shepard RA, Zouridakis A, Keszycki R, Zhang H, Mao Q  et al.  Integrity of Neuronal Size in the Entorhinal Cortex Is a Biological Substrate of Exceptional Cognitive Aging.  J Neurosci  2022 Nov 09;42(45):8587-8594. doi:10.1523/JNEUROSCI.0679-22.2022
  38. Zhao S, Li J, Zhang H, Qi L, Du Y, Kogiso M, Braun FK, Xiao S, Huang Y, Li J  et al.  Epigenetic Alterations of Repeated Relapses in Patient-matched Childhood Ependymomas.  Nat Commun  2022 Nov 05;13(1):6689. pii:6689
  39. Karras CL, Texakalidis P, Nie JZ, Trybula SJ, Youngblood MW, Sachdev S, Thomas TO, Kalapurakal J, Chandler JP, Magill ST  Outcomes following stereotactic radiosurgery for foramen magnum meningiomas: a single-center experience and systematic review of the literature.  Neurosurg Focus  2022 Nov;53(5):E6. doi:10.3171/2022.8.FOCUS22299
  40. Lowe D, Roy L, Tabocchini MA, Rühm W, Wakeford R, Woloschak GE, Laurier D  Radiation dose rate effects: what is new and what is needed?  Radiat Environ Biophys  2022 Nov;61(4):507-543. doi:10.1007/s00411-022-00996-0
  41. Krushelnytskyy MD, Youngblood MW, Lesniak MS, Kemeny HR, Fernandez LG, Burdett KLB, Zhang H, Alden TD, Dahdaleh NS  Optimizing the patient handoff and progress note documentation efficiency in the EPIC EMR system within a neurosurgery residency: A quality improvement initiative.  J Clin Neurosci  2022 Nov;105:86-90. doi:10.1016/j.jocn.2022.09.007
  42. Ma S, Rosen ST, Winqvist M, Frankfurt O, Winter JN, Gordon L, Helenowski I, Zhang H, Kreutzer J, Sönnert-Husa S  et al.  Dual targeting fixed duration frontline monoclonal antibody therapy for chronic lymphocytic leukemia: A phase 2 study.  Leuk Res  2022 Nov;122:106945. doi:10.1016/j.leukres.2022.106945
  43. Dajani S, Hill VB, Kalapurakal JA, Horbinski CM, Nesbit EG, Sachdev S, Yalamanchili A, Thomas TO  Imaging of GBM in the Age of Molecular Markers and MRI Guided Adaptive Radiation Therapy.  J Clin Med  2022 Oct 10;11(19). pii:5961
  44. Seol SW, Lee BH, Sita TL, Devineni JR, Kruser TJ, Sachdev S, Gentile M, Helenowski I, Mittal BB  Hippocampus sparing volumetric modulated arc therapy in patients with loco-regionally advanced oropharyngeal cancer.  Phys Imaging Radiat Oncol  2022 Oct;24:71-75. doi:10.1016/j.phro.2022.09.008
  45. Haley B, Zander A, Popović J, Paunesku T, Woloschak GE  Findings from international archived data: Fractionation reduces mortality risk of ionizing radiation for total doses below 4 Gray in rodents.  Mutat Res Genet Toxicol Environ Mutagen  2022 Oct;882:503537. doi:10.1016/j.mrgentox.2022.503537
  46. Bao Y, Zhang H, Hartung DM, Witkin LR, Paice JA  Medicare Part D Coverage Restrictions and Patient Cost-Sharing for Opioids Commonly Used for Cancer Pain, 2015-2021.  JCO Oncol Pract  2022 Oct;18(10):e1574-e1586. doi:10.1200/OP.21.00867
  47. Wu Y, Wu M, Vázquez-Guardado A, Kim J, Zhang X, Avila R, Kim JT, Deng Y, Yu Y, Melzer S  et al.  Wireless multi-lateral optofluidic microsystems for real-time programmable optogenetics and photopharmacology.  Nat Commun  2022 Sep 22;13(1):5571. pii:5571
  48. Yalamanchili A, Thomas TO, Dajani S, Hayes JP  Evolution of Radiation Therapy in Pancreas Cancer Management toward MRI-Guided Adaptive Radiation Therapy.  J Clin Med  2022 Sep 13;11(18). pii:5380
  49. Karpouzian-Rogers T, Hurley R, Seckin M, Moeller S, Gill N, Zhang H, Coventry C, Nelson M, Weintraub S, Rogalski E  et al.  Eye movements as a measure of word comprehension deficits in primary progressive aphasia.  Brain Lang  2022 Sep;232:105165. doi:10.1016/j.bandl.2022.105165
  50. Li F, Bondra KM, Ghilu S, Studebaker A, Liu Q, Michalek JE, Kogiso M, Li XN, Kalapurakal JA, James CD  et al.  Regulation of TORC1 by MAPK Signaling Determines Sensitivity and Acquired Resistance to Trametinib in Pediatric BRAFV600E Brain Tumor Models.  Clin Cancer Res  2022 Sep 01;28(17):3836-3849. doi:10.1158/1078-0432.CCR-22-1052