Publications
Browse the list below to see the latest scientific publications stemming from our institute faculty’s work. To view publications of specific AI faculty, please visit Membership and select a profile link.
- Friedewald SM, Sieniek M, Jansen S, Mahvar F, Kohlberger T, Schacht D, Bhole S, Gupta D, Prabhakara S, McKinney SM et al. Triaging mammography with artificial intelligence: an implementation study. Breast Cancer Res Treat 2025 May;211(1):1-10. doi:10.1007/s10549-025-07616-7
- Yu JK, Gauen AM, Zmora R, Petito LC, Kho AN, Smith SM, Allen NB Patient Predictors of Combination Therapy as Initial Hypertension Treatment: The AOURP (All of Us Research Program) Registry. J Am Heart Assoc 2025 Mar 26;:e037626. doi:10.1161/JAHA.124.037626
- Wang A, French D, Black B, Kho AN Cohort study examining social determinants of health and their association with mortality among hospitalised adults in New York and California. BMJ Public Health 2025 Jan;3(1):e001266. pii:e001266
- Eduardo MB, Cottone G, McCloskey CW, Liu S, Palma FR, Zappia MP, Islam ABMMK, Gao P, Setya J, Dennis S et al. A metabolic shift to the serine pathway induced by lipids fosters epigenetic reprogramming in nontransformed breast cells. Sci Adv 2025 Mar 21;11(12):eads9182. pii:eads9182
- Brokamp E, Miller-Fleming T, Scalici A, Hooker G, Hamid R, Velez Edwards D, Chung W, Luo Y, Kiryluk K, Limidi NA et al. Systematic Method for Classifying Multiple Congenital Anomaly Cases in Electronic Health Records. Genet Med 2025 Mar 18;:101415. doi:10.1016/j.gim.2025.101415
- Sandlow S, Carbunaru S, Sun Z, Ofori B, Liu Y, Li E, Hollowell CMP, Vidal P, Perry KT, Patel HD et al. Negative Predictive Value of a Prostate MRI in Black Men: Implications for Biopsy Decision-Making. J Urol 2025 Mar 17;:101097JU0000000000004498. doi:10.1097/JU.0000000000004498
- Li M, Fass OZ, Carlson DA, Pitisuttithum P, Goudie E, Kristinsdottir K, Kaklamanos E, Etemadi M, Keswani RN, Ellison A et al. Endoscopic Prediction of Achalasia: Putting the CART Before the CARS. Neurogastroenterol Motil 2025 Mar 17;:e70024. doi:10.1111/nmo.70024
- Armoundas AA, Ahmad FS, Attia ZI, Doudesis D, Khera R, Kyriakoulis KG, Stergiou GS, Tang WHW Controversy in Hypertension: Pro-Side of the Argument Using Artificial Intelligence for Hypertension Diagnosis and Management. Hypertension 2025 Mar 17;. doi:10.1161/HYPERTENSIONAHA.124.22349
- Wang Q, Wang J, Mathur R, Youngblood MW, Jin Q, Hou Y, Stasiak LA, Luan Y, Zhao H, Hilz S et al. Spatial 3D genome organization reveals intratumor heterogeneity in primary glioblastoma samples. Sci Adv 2025 Mar 14;11(11):eadn2830. pii:eadn2830
- Knapp AA, Cohen K, Kruzan KP, Kornfield R, Herrera M, Pederson AB, Lee S, Macapagal K, Roulston CA, Clarke K et al. Teen Perspectives on Integrating Digital Mental Health Programs for Teens Into Public Libraries ("I Was Always at the Library"): Qualitative Interview Study. JMIR Form Res 2025 Mar 13;9:e67454. doi:10.2196/67454
- Rojas JC, Lyons PG, Chhikara K, Chaudhari V, Bhavani SV, Nour M, Buell KG, Smith KD, Gao CA, Amagai S et al. A common longitudinal intensive care unit data format (CLIF) for critical illness research. Intensive Care Med 2025 Mar 13;. doi:10.1007/s00134-025-07848-7
- Pandey A, Lewis GD, Borlaug BA, Shah SJ, Sauer AJ, Litwin S, Sharma K, Jorkasky DK, Tarka EA, Khan SM et al. Novel Controlled Metabolic Accelerator for Obesity-Related HFpEF: The HuMAIN-HFpEF Randomized Clinical Trial. JAMA Cardiol 2025 Mar 12;. pii:e250103
- Filipp M, Ge ZD, DeBerge M, Lantz C, Glinton K, Gao P, Smolgovsky S, Dai J, Zhao YY, Yvan-Charvet L et al. Myeloid Fatty Acid Metabolism Activates Neighboring Hematopoietic Stem Cells to Promote Heart Failure With Preserved Ejection Fraction. Circulation 2025 Mar 12;. doi:10.1161/CIRCULATIONAHA.124.070248
- Tavolinejad H, Boczar KE, Spronck B, Maynard H, Bertoni AG, Shah SJ, Chirinos JA Determinants of Cardio-Ankle Vascular Index and Heart-Thigh β Index in a US Cohort: The MESA. Hypertension 2025 Mar 07;. doi:10.1161/HYPERTENSIONAHA.124.23970
- McDowell K, Docherty KF, Campbell RT, Henderson AD, Jhund PS, Claggett BL, Desai AS, Lay-Flurrie J, Hofmeister L, Scalise A et al. Finerenone for Heart Failure and Risk Estimated by the PREDICT-HFpEF Model: A Secondary Analysis of FINEARTS-HF. JAMA Cardiol 2025 Mar 05;. pii:e250025
- Eisinger-Mathason TSK, Leshin J, Lahoti V, Fridsma DB, Mucaj V, Kho AN Data linkage multiplies research insights across diverse healthcare sectors. Commun Med (Lond) 2025 Mar 04;5(1):58. pii:58
- Kanwar K, Ramachandran R, Stein JD, Andrews CA, Chaudhury AS, Ige M, Zhou X, Marwah S, Li Y, Evans CT et al. The Association of Social Determinants of Health on Monitoring for Disease Progression Among Patients With Primary Open-Angle Glaucoma. Transl Vis Sci Technol 2025 Mar 03;14(3):15. pii:15
- Shah SJ, Bonderman D, Borlaug BA, Cleland JGF, Lack G, Lu W, Voors AA, Zannad F, Gladwin MT Macitentan for Heart Failure With Preserved or Mildly Reduced Ejection Fraction and Pulmonary Vascular Disease: Results of the SERENADE Randomized Clinical Trial and Open-Label Extension Study. Circ Heart Fail 2025 Mar;18(3):e011381. doi:10.1161/CIRCHEARTFAILURE.123.011381
- Gundogdu B, Chatterjee A, Medved M, Bagci U, Karczmar GS, Oto A Physics-Informed Autoencoder for Prostate Tissue Microstructure Profiling with Hybrid Multidimensional MRI. Radiol Artif Intell 2025 Mar;7(2):e240167. pii:e240167
- Davies MJ, van der Meer P, Verma S, Patel S, Chinnakondepalli KM, Borlaug BA, Butler J, Kitzman DW, Shah SJ, Harring S et al. Semaglutide in obesity-related heart failure with preserved ejection fraction and type 2 diabetes across baseline HbA1c levels (STEP-HFpEF DM): a prespecified analysis of heart failure and metabolic outcomes from a randomised, placebo-controlled trial. Lancet Diabetes Endocrinol 2025 Mar;13(3):196-209. doi:10.1016/S2213-8587(24)00304-8
- Giuffrida AS, Sheriff S, Huang V, Weinberg BD, Cooper LAD, Liu Y, Soher BJ, Treadway M, Maudsley AA, Shim H NNFit: A Self-Supervised Deep Learning Method for Accelerated Quantification of High-Resolution Short-Echo-Time MR Spectroscopy Datasets. Radiol Artif Intell 2025 Mar;7(2):e230579. pii:e230579
- Zamani P, Shah SJ, Cohen JB, Zhao M, Yang W, Afable JL, Caturla M, Maynard H, Pourmussa B, Demastus C et al. Potassium Nitrate in Heart Failure With Preserved Ejection Fraction: A Randomized Clinical Trial. JAMA Cardiol 2025 Mar 01;10(3):284-289. doi:10.1001/jamacardio.2024.4417
- Jain K, Katz R, Isakova T, Kizer JR, Sharma S, Psaty BM, Shah SJ, Ix J, Mehta R Association of Fibroblast Growth Factor 23 and Cardiac Mechanics in the Cardiovascular Health Study. Kidney360 2025 Mar 01;6(3):391-399. doi:10.34067/KID.0000000643
- Ostrominski JW, Claggett BL, Miao ZM, Filippatos G, Desai AS, Jhund PS, Henderson A, Brinker M, Schloemer P, Viswanathan P et al. Efficacy and Safety of Finerenone in Type 2 Diabetes: A Pooled Analysis of Trials of Heart Failure and Chronic Kidney Disease. Diabetes Care 2025 Feb 28;. pii:dc241873
- Kruzan KP, Washburn JJ, Aaby D, Nguyen T, Mohr DC Subgroups of non-suicidal self-injury in a large diverse sample of online help-seekers. Front Psychiatry 2025;16:1513685. pii:1513685
- Goreish MH, Gennaro N, Perronne L, Durak G, Borhani AA, Savas H, Kelahan L, Avery R, Subedi K, Agirlar Trabzonlu T et al. Paradoxical Response to Neoadjuvant Therapy in Undifferentiated Pleomorphic Sarcoma: Increased Tumor Size on MRI Associated with Favorable Pathology. Cancers (Basel) 2025 Feb 27;17(5). pii:830
- Meyerhoff J, Popowski SA, Lakhtakia T, Tack E, Kornfield R, Kruzan KP, Krause CJ, Nguyen T, Rushton K, Pisani AR et al. Automated Digital Safety Planning Interventions for Young Adults: Qualitative Study Using Online Co-design Methods. JMIR Form Res 2025 Feb 26;9:e69602. pii:e69602
- Chen C, Nishtala A, Li E, Schultz WM, Baldridge AS, Groenendyk JW, Lee DC, Shah SJ, Burt RK, Freed BH The effect of hematopoietic stem cell transplantation on cardiac mechanics in systemic sclerosis. Int J Cardiovasc Imaging 2025 Feb 26;. doi:10.1007/s10554-025-03365-2
- Gennaro N, Soliman M, Borhani AA, Kelahan L, Savas H, Avery R, Subedi K, Trabzonlu TA, Krumpelman C, Yaghmai V et al. Delta Radiomics and Tumor Size: A New Predictive Radiomics Model for Chemotherapy Response in Liver Metastases from Breast and Colorectal Cancer. Tomography 2025 Feb 20;11(3). pii:20
- Inciardi RM, Lu H, Claggett BL, Desai AS, Jhund PS, Lam CSP, Kosiborod MN, Inzucchi SE, Martinez FA, de Boer RA et al. Severe Heart Failure and Treatment With Dapagliflozin Across the Ejection Fraction Spectrum: DAPA-HF and DELIVER. JACC Heart Fail 2025 Feb 20;. pii:S2213-1779(25)00080-0
- Gustafson AA, Trinh KV, Lomasney JW, Shah SJ, Hinchcliff ME Acute Systemic Sclerosis-Associated Cardiomyopathy That Improved With Glucocorticoids and Cyclophosphamide. JACC Case Rep 2025 Feb 19;30(4):102948. pii:102948
- Quiriarte H, Cho E, Kim Y, Doiron JE, Davis G, Stampley J, Noland RC, Li Z, Shah SJ, Irving BA et al. Impact of Voluntary Exercise on Systemic Inflammation in a 2? Hit Model of Heart Failure With Preserved Ejection Fraction. J Am Heart Assoc 2025 Feb 18;14(4):e038789. doi:10.1161/JAHA.124.038789
- Luo Y, Li Y, Ogunyemi O, Koski E, Himes BE Leveraging large language models for academic conference organization. NPJ Digit Med 2025 Feb 14;8(1):101. pii:101
- Mohammadi M, Hasjim BJ, Balbale SN, Polineni P, Huang AA, Paukner M, Banea T, Dentici O, Vitello DJ, Obayemi JE et al. Disease trajectory and competing risks of patients with cirrhosis in the US. PLoS One 2025;20(2):e0313152. pii:e0313152
- Braumann S, Macherey-Meyer S, Polzin A, Costard-Jäckle A, Morbach C, Haring B, Lapp H, Ten Cate V, Gieswinkel A, Weliwitage J et al. MYSTERY-HF - Myeloperoxidase Inhibition in Patients With Heart Failure and Reduced Ejection Fraction - a Phase II Randomized Controlled Trial. Circulation 2025 Feb 12;. doi:10.1161/CIRCULATIONAHA.125.074085
- Zhou X, Zhou J, Wang C, Xie Q, Ding K, Mao C, Liu Y, Cao Z, Chu H, Chen X et al. PH-LLM: Public Health Large Language Models for Infoveillance. medRxiv 2025 Feb 10;. pii:2025.02.08.25321587
- Raeisi Dehkordi S, Wong IT, Ni J, Luebeck J, Zhu K, Prasad G, Krockenberger L, Xu G, Chowdhury B, Rajkumar U et al. Breakage fusion bridge cycles drive high oncogene number with moderate intratumoural heterogeneity. Nat Commun 2025 Feb 10;16(1):1497. pii:1497
- Lyu H, Chen X, Cheng Y, Zhang T, Wang P, Wong JH, Wang J, Stasiak L, Sun L, Yang G et al. Pioneer factor GATA6 promotes colorectal cancer through 3D genome regulation. Sci Adv 2025 Feb 07;11(6):eads4985. pii:eads4985
- Liu H, Abedini A, Ha E, Ma Z, Sheng X, Dumoulin B, Qiu C, Aranyi T, Li S, Dittrich N et al. Kidney multiome-based genetic scorecard reveals convergent coding and regulatory variants. Science 2025 Feb 07;387(6734):eadp4753. doi:10.1126/science.adp4753
- Culler K, Zelnick LR, Mehta RC, de Sosa GR, Kansal M, Rao PS, Bhat Z, Taliercio J, Horwitz E, Chen J et al. The ICAM1 p.K56M variant and risk of heart failure in chronic kidney disease: the Chronic Renal Insufficiency Cohort study. Heart 2025 Feb 06;. pii:heartjnl-2024-325205
- Jakubek YA, Ma X, Stilp AM, Yu F, Bacon J, Wong JW, Aguet F, Ardlie K, Arnett DK, Barnes K et al. Genomic and phenotypic correlates of mosaic loss of chromosome Y in blood. Am J Hum Genet 2025 Feb 06;112(2):276-290. doi:10.1016/j.ajhg.2024.12.014
- Zhang D, Stein R, Lu Y, Zhou T, Lei Y, Li L, Chen J, Arnold J, Becich MJ, Chrischilles EA et al. Pediatric Gastrointestinal Tract Outcomes During the Postacute Phase of COVID-19. JAMA Netw Open 2025 Feb 03;8(2):e2458366. pii:e2458366
- Adli M, Przybyla L, Burdett T, Burridge PW, Cacheiro P, Chang HY, Engreitz JM, Gilbert LA, Greenleaf WJ, Hsu L et al. MorPhiC Consortium: towards functional characterization of all human genes. Nature 2025 Feb;638(8050):351-359. doi:10.1038/s41586-024-08243-w
- Butt JH, Jhund PS, Henderson AD, Claggett BL, Desai AS, Viswanathan P, Kolkhof P, Schloemer P, Amarante F, Lam CSP et al. Finerenone and new-onset diabetes in heart failure: a prespecified analysis of the FINEARTS-HF trial. Lancet Diabetes Endocrinol 2025 Feb;13(2):107-118. doi:10.1016/S2213-8587(24)00309-7
- Bannon J, Smith JD, Van Ryzin MJ, McHugh M, Heinrich J, Walunas TL, Kho AN Design of INSPIRE: Evaluation of the effectiveness of practice facilitation on implementation of screening, brief interventions, referral to treatment and medication for unhealthy alcohol use identification and treatment in primary care. Contemp Clin Trials Commun 2025 Feb;43:101413. pii:101413
- Cai W, Liu X, Barajas S, Xiao S, Vemula S, Chen H, Yang Y, Bochers C, Henley D, Liu S et al. Polycomb group protein Mel18 inhibits hematopoietic stem cell self-renewal through repressing the transcription of self-renewal and proliferation genes. Leukemia 2025 Feb;39(2):296-307. doi:10.1038/s41375-024-02462-w
- Shah SJ, Rigolli M, Javidialsaadi A, Patel RB, Khadra S, Goyal P, Little S, Wever-Pinzon O, Owens AT, Skali H et al. Cardiac Myosin Inhibition in Heart Failure With Normal and Supranormal Ejection Fraction: Primary Results of the EMBARK-HFpEF Trial. JAMA Cardiol 2025 Feb 01;10(2):170-175. doi:10.1001/jamacardio.2024.3810
- Vaduganathan M, Claggett BL, Desai AS, Jhund PS, Lam CSP, Senni M, Shah SJ, Voors AA, Zannad F, Pitt B et al. Estimated Long-Term Benefits of Finerenone in Heart Failure: A Prespecified Secondary Analysis of the FINEARTS-HF Randomized Clinical Trial. JAMA Cardiol 2025 Feb 01;10(2):176-181. doi:10.1001/jamacardio.2024.3782
- Peterson TE, Lima JAC, Shah SJ, Bluemke DA, Bertoni AG, Liu Y, Ngo D, Varadarajan V, Mychaleckyj JC, Johnson CW et al. Proteomics of left ventricular structure in the Multi-Ethnic Study of Atherosclerosis. ESC Heart Fail 2025 Feb;12(1):239-249. doi:10.1002/ehf2.15073
- Koh J, Caron S, Watters AN, Vaidyanathan M, Melnick D, Santi A, Hudson K, Arguelles C, Mathur P, Etemadi M Technological Adjuncts to Streamline Patient Recruitment, Informed Consent, and Data Management Processes in Clinical Research: Observational Study. JMIR Form Res 2025 Jan 29;9:e58628. pii:e58628